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torchio

Tools like TorchIO are a symptom of the maturation of medical AI research using deep learning techniques Jack Clark, Policy Director , Co-Founder and Head of Policy of Anthropic ( · License unknown · Maintenance active

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README

TorchIO logo

Tools like TorchIO are a symptom of the maturation of medical AI research using deep learning techniques.

Jack Clark, Policy Director
at OpenAI, Co-Founder and Head of Policy of Anthropic (link).


<table align="center">
<tr>
<td align="left">
<b>Package</b>
</td>
<td align="center">
<a href="https://pypi.org/project/torchio/">
<img src="https://img.shields.io/pypi/dm/torchio.svg?label=PyPI%20downloads&logo=python&logoColor=white" alt="PyPI downloads">
</a>
<a href="https://pypi.org/project/torchio/">
<img src="https://img.shields.io/pypi/v/torchio?label=PyPI%20version&logo=python&logoColor=white" alt="PyPI version">
</a>
<a href="https://anaconda.org/conda-forge/torchio">
<img src="https://img.shields.io/conda/v/conda-forge/torchio.svg?label=conda-forge&logo=conda-forge" alt="Conda version">
</a>
</td>
</tr>
<tr>
<td align="left">
<b>CI</b>
</td>
<td align="center">
<a href="https://github.com/TorchIO-project/torchio/actions/workflows/tests.yml">
<img src="https://github.com/TorchIO-project/torchio/actions/workflows/tests.yml/badge.svg" alt="Tests status">
</a>
<a href="https://github.com/TorchIO-project/torchio/actions/workflows/docs.yml">
<img src="https://github.com/TorchIO-project/torchio/actions/workflows/docs.yml/badge.svg" alt="Documentation status">
</a>
<a href="https://app.codecov.io/github/TorchIO-project/torchio">
<img src="https://codecov.io/gh/TorchIO-project/torchio/branch/main/graphs/badge.svg" alt="Coverage status">
</a>
</td>
</tr>
<tr>
<td align="left">
<b>Code</b>
</td>
<td align="center">
<a href="https://docs.astral.sh/ruff/">
<img src="https://camo.githubusercontent.com/bb88127790fb054cba2caf3f3be2569c1b97bb45a44b47b52d738f8781a8ede4/68747470733a2f2f696d672e736869656c64732e696f2f656e64706f696e743f75726c3d68747470733a2f2f7261772e67697468756275736572636f6e74656e742e636f6d2f636861726c6965726d617273682f727566662f6d61696e2f6173736574732f62616467652f76312e6a736f6e" alt="Code style">
</a>
<a href="https://scrutinizer-ci.com/g/TorchIO-project/torchio/?branch=main">
<img src="https://img.shields.io/scrutinizer/g/TorchIO-project/torchio.svg?label=Code%20quality&logo=scrutinizer" alt="Code quality">
</a>
</td>
</tr>
<tr>
<td align="left">
<b>Tutorials</b>
</td>
<td align="center">
<a href="https://github.com/TorchIO-project/torchio/blob/main/tutorials/README.md">
<img src="https://colab.research.google.com/assets/colab-badge.svg" alt="Google Colab">
</a>
</td>
</tr>
<tr>
<td align="left">
<b>Community</b>
</td>
<td align="center">
<a href="https://www.youtube.com/watch?v=UEUVSw5-M9M">
<img src="https://img.shields.io/youtube/views/UEUVSw5-M9M?label=watch&style=social" alt="YouTube">
</a>
<a href="https://github.com/TorchIO-project/torchio#contributors">
<img src="https://img.shields.io/github/all-contributors/TorchIO-project/torchio?color=ee8449&style=flat-square" alt="All Contributors">
</a>
</td>
</tr>
</table>


Progressive artifacts

Augmentation


<table align="center">
<tr>
<td align="center">Original</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomblur">Random blur</a>
</td>
</tr>
<tr>
<td align="center">

Original

</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomblur">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/2_RandomBlur_mri.gif" alt="Random blur">
</a>
</td>
</tr>
<tr>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomflip">Random flip</a>
</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomnoise">Random noise</a>
</td>
</tr>
<tr>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomflip">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/3_RandomFlip_mri.gif" alt="Random flip">
</a>
</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomnoise">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/4_Compose_mri.gif" alt="Random noise">
</a>
</td>
</tr>
<tr>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomaffine">Random affine transformation</a>
</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomelasticdeformation">Random elastic transformation</a>
</td>
</tr>
<tr>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomaffine">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/5_RandomAffine_mri.gif" alt="Random affine transformation">
</a>
</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomelasticdeformation">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/6_RandomElasticDeformation_mri.gif" alt="Random elastic transformation">
</a>
</td>
</tr>
<tr>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randombiasfield">Random bias field artifact</a>
</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randommotion">Random motion artifact</a>
</td>
</tr>
<tr>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randombiasfield">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/7_RandomBiasField_mri.gif" alt="Random bias field artifact">
</a>
</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randommotion">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/8_RandomMotion_mri.gif" alt="Random motion artifact">
</a>
</td>
</tr>
<tr>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomspike">Random spike artifact</a>
</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomghosting">Random ghosting artifact</a>
</td>
</tr>
<tr>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomspike">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/9_RandomSpike_mri.gif" alt="Random spike artifact">
</a>
</td>
<td align="center">
<a href="https://docs.torchio.org/transforms/augmentation.html#randomghosting">
<img src="https://raw.githubusercontent.com/TorchIO-project/torchio/main/docs/images/gifs_readme/10_RandomGhosting_mri.gif" alt="Random ghosting artifact">
</a>
</td>
</tr>
</table>


Queue

(Queue
for patch-based training)


TorchIO is a Python package containing a set of tools to efficiently
read, preprocess, sample, augment, and write 3D medical images in deep learning applications
written in PyTorch,
including intensity and spatial transforms
for data augmentation and preprocessing.
Transforms include typical computer vision operations
such as random affine transformations and also domain-specific ones such as
simulation of intensity artifacts due to
MRI magnetic field inhomogeneity
or k-space motion artifacts.

This package has been greatly inspired by NiftyNet,
which is not actively maintained anymore.

Credits

If you like this repository, please click on Star!

If you use this package for your research, please cite our paper:

F. Pérez-García, R. Sparks, and S. Ourselin. TorchIO: a Python library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning. Computer Methods and Programs in Biomedicine (June 2021), p. 106236. ISSN: 0169-2607.doi:10.1016/j.cmpb.2021.106236.

BibTeX entry:

@article{perez-garcia_torchio_2021,
    title = {{TorchIO}: a {Python} library for efficient loading, preprocessing, augmentation and patch-based sampling of medical images in deep learning},
    journal = {Computer Methods and Programs in Biomedicine},
    pages = {106236},
    year = {2021},
    issn = {0169-2607},
    doi = {https://doi.org/10.1016/j.cmpb.2021.106236},
    url = {https://www.sciencedirect.com/science/article/pii/S0169260721003102},
    author = {P{\'e}rez-Garc{\'i}a, Fernando and Sparks, Rachel and Ourselin, S{\'e}bastien},
}

This project was originally supported by the following institutions:

Getting started

See Getting started for
installation
instructions
and a Hello, World!
example.

Longer usage examples can be found in the
tutorials.

Read the documentation for more information.

Please
create an issue
if you think something is missing.

Contributors

Thanks goes to all these people (emoji key):

<table>
<tbody>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/fepegar">

Fernando Pérez-García

<br /><sub><b>Fernando Pérez-García</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=fepegar" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=fepegar" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/romainVala">

valabregue

<br /><sub><b>valabregue</b></sub></a><br /><a href="#ideas-romainVala" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/TorchIO-project/torchio/pulls?q=is%3Apr+reviewed-by%3AromainVala" title="Reviewed Pull Requests">👀</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=romainVala" title="Code">💻</a> <a href="#question-romainVala" title="Answering Questions">💬</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AromainVala" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/GFabien">

GFabien

<br /><sub><b>GFabien</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=GFabien" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/pulls?q=is%3Apr+reviewed-by%3AGFabien" title="Reviewed Pull Requests">👀</a> <a href="#ideas-GFabien" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/GReguig">

G.Reguig

<br /><sub><b>G.Reguig</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=GReguig" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/nwschurink">

Niels Schurink

<br /><sub><b>Niels Schurink</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=nwschurink" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://www.linkedin.com/in/ibrhad/ ">

Ibrahim Hadzic

<br /><sub><b>Ibrahim Hadzic</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aibro45" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/ReubenDo">

ReubenDo

<br /><sub><b>ReubenDo</b></sub></a><br /><a href="#ideas-ReubenDo" title="Ideas, Planning, & Feedback">🤔</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="http://julianklug.com">

Julian Klug

<br /><sub><b>Julian Klug</b></sub></a><br /><a href="#ideas-MonsieurWave" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/dvolgyes">

David Völgyes

<br /><sub><b>David Völgyes</b></sub></a><br /><a href="#ideas-dvolgyes" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=dvolgyes" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://www.linkedin.com/in/jfillionr/">

Jean-Christophe Fillion-Robin

<br /><sub><b>Jean-Christophe Fillion-Robin</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=jcfr" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://surajpai.tech">

Suraj Pai

<br /><sub><b>Suraj Pai</b></sub></a><br /><a href="#ideas-surajpaib" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/bcdarwin">

Ben Darwin

<br /><sub><b>Ben Darwin</b></sub></a><br /><a href="#ideas-bcdarwin" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/OeslleLucena">

Oeslle Lucena

<br /><sub><b>Oeslle Lucena</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AOeslleLucena" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://www.soumick.com">

Soumick Chatterjee

<br /><sub><b>Soumick Chatterjee</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=soumickmj" title="Code">💻</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/neuronflow">

neuronflow

<br /><sub><b>neuronflow</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=neuronflow" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/jwitos">

Jan Witowski

<br /><sub><b>Jan Witowski</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=jwitos" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/dmus">

Derk Mus

<br /><sub><b>Derk Mus</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=dmus" title="Documentation">📖</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=dmus" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Admus" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://www.linkedin.com/in/che85">

Christian Herz

<br /><sub><b>Christian Herz</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Ache85" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/efirdc">

Cory Efird

<br /><sub><b>Cory Efird</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=efirdc" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aefirdc" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/estebvac">

Esteban Vaca C.

<br /><sub><b>Esteban Vaca C.</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aestebvac" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://stackoverflow.com/users/3250829/rayryeng?tab=profile">

Ray Phan

<br /><sub><b>Ray Phan</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Arayryeng" title="Bug reports">🐛</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/Linardos">

Akis Linardos

<br /><sub><b>Akis Linardos</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3ALinardos" title="Bug reports">🐛</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=Linardos" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://[email protected]">

Nina Montana-Brown

<br /><sub><b>Nina Montana-Brown</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=NMontanaBrown" title="Documentation">📖</a> <a href="#infra-NMontanaBrown" title="Infrastructure (Hosting, Build-Tools, etc)">🚇</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/fabien-brulport">

fabien-brulport

<br /><sub><b>fabien-brulport</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Afabien-brulport" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/malteekj">

malteekj

<br /><sub><b>malteekj</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Amalteekj" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/diazandr3s">

Andres Diaz-Pinto

<br /><sub><b>Andres Diaz-Pinto</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Adiazandr3s" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://www.cbica.upenn.edu/spati">

Sarthak Pati

<br /><sub><b>Sarthak Pati</b></sub></a><br /><a href="#platform-sarthakpati" title="Packaging/porting to new platform">📦</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=sarthakpati" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/GabriellaKamlish">

GabriellaKamlish

<br /><sub><b>GabriellaKamlish</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AGabriellaKamlish" title="Bug reports">🐛</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/TylerSpears">

Tyler Spears

<br /><sub><b>Tyler Spears</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3ATylerSpears" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://dagut.ru">

DaGuT

<br /><sub><b>DaGuT</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=DaGuT" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/hsiangyuzhao">

Xiangyu Zhao

<br /><sub><b>Xiangyu Zhao</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Ahsiangyuzhao" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://siahuat0727.github.io">

siahuat0727

<br /><sub><b>siahuat0727</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=siahuat0727" title="Documentation">📖</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Asiahuat0727" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/Svdvoort">

Svdvoort

<br /><sub><b>Svdvoort</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=Svdvoort" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://www.linkedin.com/in/alban-steff-260ab715b/">

Albans98

<br /><sub><b>Albans98</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=Albans98" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://mattwarkentin.github.io/">

Matthew T. Warkentin

<br /><sub><b>Matthew T. Warkentin</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=mattwarkentin" title="Code">💻</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/glupol">

glupol

<br /><sub><b>glupol</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aglupol" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/ramonemiliani93">

ramonemiliani93

<br /><sub><b>ramonemiliani93</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=ramonemiliani93" title="Documentation">📖</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aramonemiliani93" title="Bug reports">🐛</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=ramonemiliani93" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/justusschock">

Justus Schock

<br /><sub><b>Justus Schock</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=justusschock" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Ajustusschock" title="Bug reports">🐛</a> <a href="#ideas-justusschock" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/TorchIO-project/torchio/pulls?q=is%3Apr+reviewed-by%3Ajustusschock" title="Reviewed Pull Requests">👀</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/cepa995">

Stefan Milorad Radonjić

<br /><sub><b>Stefan Milorad Radonjić</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Acepa995" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/srg9000">

Sajan Gohil

<br /><sub><b>Sajan Gohil</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Asrg9000" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://bandism.net/">

Ikko Ashimine

<br /><sub><b>Ikko Ashimine</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=eltociear" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/laynr">

laynr

<br /><sub><b>laynr</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=laynr" title="Documentation">📖</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/omarespejel">

Omar U. Espejel

<br /><sub><b>Omar U. Espejel</b></sub></a><br /><a href="#audio-omarespejel" title="Audio">🔊</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/jamesobutler">

James Butler

<br /><sub><b>James Butler</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Ajamesobutler" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/res191">

res191

<br /><sub><b>res191</b></sub></a><br /><a href="#fundingFinding-res191" title="Funding Finding">🔍</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/nengwp">

nengwp

<br /><sub><b>nengwp</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Anengwp" title="Bug reports">🐛</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=nengwp" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/susanveraclarke">

susanveraclarke

<br /><sub><b>susanveraclarke</b></sub></a><br /><a href="#design-susanveraclarke" title="Design">🎨</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://nepersica.tistory.com">

nepersica

<br /><sub><b>nepersica</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Anepersica" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://spenhouet.com">

Sebastian Penhouet

<br /><sub><b>Sebastian Penhouet</b></sub></a><br /><a href="#ideas-Spenhouet" title="Ideas, Planning, & Feedback">🤔</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/Bigsealion">

Bigsealion

<br /><sub><b>Bigsealion</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3ABigsealion" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://www.kitware.com/dzenan-zukic/">

Dženan Zukić

<br /><sub><b>Dženan Zukić</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/pulls?q=is%3Apr+reviewed-by%3Adzenanz" title="Reviewed Pull Requests">👀</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/vasl12">

vasl12

<br /><sub><b>vasl12</b></sub></a><br /><a href="#tutorial-vasl12" title="Tutorials">✅</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Avasl12" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://perso.telecom-bretagne.eu/francoisrousseau">

François Rousseau

<br /><sub><b>François Rousseau</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Arousseau" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/snavalm">

snavalm

<br /><sub><b>snavalm</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=snavalm" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://jcreinhold.com">

Jacob Reinhold

<br /><sub><b>Jacob Reinhold</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=jcreinhold" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/Hsuxu">

Hsu

<br /><sub><b>Hsu</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AHsuxu" title="Bug reports">🐛</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/snipdome">

snipdome

<br /><sub><b>snipdome</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Asnipdome" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/iamSmallY">

SmallY

<br /><sub><b>SmallY</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AiamSmallY" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/guigautier">

guigautier

<br /><sub><b>guigautier</b></sub></a><br /><a href="#ideas-guigautier" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/AyedSamy">

AyedSamy

<br /><sub><b>AyedSamy</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AAyedSamy" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://delanover.com">

J. Miguel Valverde

<br /><sub><b>J. Miguel Valverde</b></sub></a><br /><a href="#ideas-jmlipman" title="Ideas, Planning, & Feedback">🤔</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=jmlipman" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Ajmlipman" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://josegcpa.github.io">

José Guilherme Almeida

<br /><sub><b>José Guilherme Almeida</b></sub></a><br /><a href="#ideas-josegcpa" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/saikhu">

Asim Usman

<br /><sub><b>Asim Usman</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Asaikhu" title="Bug reports">🐛</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/cbri92">

cbri92

<br /><sub><b>cbri92</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Acbri92" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/iimog">

Markus J. Ankenbrand

<br /><sub><b>Markus J. Ankenbrand</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aiimog" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://yanivresearch.info/">

Ziv Yaniv

<br /><sub><b>Ziv Yaniv</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=zivy" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/LucaLumetti">

Luca Lumetti

<br /><sub><b>Luca Lumetti</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=LucaLumetti" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=LucaLumetti" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/chagelo">

chagelo

<br /><sub><b>chagelo</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Achagelo" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/mueller-franzes">

mueller-franzes

<br /><sub><b>mueller-franzes</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=mueller-franzes" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Amueller-franzes" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/wahabk">

Abdelwahab Kawafi

<br /><sub><b>Abdelwahab Kawafi</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Awahabk" title="Bug reports">🐛</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="http://arthurmasson.xyz">

Arthur Masson

<br /><sub><b>Arthur Masson</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aarthursw" title="Bug reports">🐛</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=arthursw" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/hsyang1222">

양현식

<br /><sub><b>양현식</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=hsyang1222" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/nicoloesch">

nicoloesch

<br /><sub><b>nicoloesch</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=nicoloesch" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Anicoloesch" title="Bug reports">🐛</a> <a href="#design-nicoloesch" title="Design">🎨</a> <a href="#maintenance-nicoloesch" title="Maintenance">🚧</a> <a href="#question-nicoloesch" title="Answering Questions">💬</a> <a href="https://github.com/TorchIO-project/torchio/pulls?q=is%3Apr+reviewed-by%3Anicoloesch" title="Reviewed Pull Requests">👀</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/vedal">

Amund Vedal

<br /><sub><b>Amund Vedal</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=vedal" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/alabamagan">

Alabamagan

<br /><sub><b>Alabamagan</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aalabamagan" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/sbdoherty">

sbdoherty

<br /><sub><b>sbdoherty</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=sbdoherty" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/Zhack47">

Zhack47

<br /><sub><b>Zhack47</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AZhack47" title="Bug reports">🐛</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/blakedewey">

Blake Dewey

<br /><sub><b>Blake Dewey</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=blakedewey" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/haughty-yeon">

Doyeon Kim

<br /><sub><b>Doyeon Kim</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Ahaughty-yeon" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/KonoMaxi">

KonoMaxi

<br /><sub><b>KonoMaxi</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AKonoMaxi" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://www.etsmtl.ca">

Laurent Chauvin

<br /><sub><b>Laurent Chauvin</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Alchauvin" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://christianhinge.com">

Christian Hinge

<br /><sub><b>Christian Hinge</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AChristianHinge" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/zzz123xyz">

zzz123xyz

<br /><sub><b>zzz123xyz</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Azzz123xyz" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://aminalam.info">

Amin Alam

<br /><sub><b>Amin Alam</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=AminAlam" title="Documentation">📖</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/marius-sm">

marius-sm

<br /><sub><b>marius-sm</b></sub></a><br /><a href="#ideas-marius-sm" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/haarisr">

haarisr

<br /><sub><b>haarisr</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=haarisr" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/c-winder">

Chris Winder

<br /><sub><b>Chris Winder</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Ac-winder" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://www.linkedin.com/in/ricky-walsh/">

Ricky Walsh

<br /><sub><b>Ricky Walsh</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=rickymwalsh" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/sravan953">

Keerthi Sravan Ravi

<br /><sub><b>Keerthi Sravan Ravi</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Asravan953" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/RJacobArthrex">

Rahul Kurian Jacob

<br /><sub><b>Rahul Kurian Jacob</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=RJacobArthrex" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://ethan.roo.ke">

Ethan Rooke

<br /><sub><b>Ethan Rooke</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=erooke" title="Documentation">📖</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/mrdkucher">

David Kucher

<br /><sub><b>David Kucher</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=mrdkucher" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/StijnvWijn">

StijnvWijn

<br /><sub><b>StijnvWijn</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=StijnvWijn" title="Code">💻</a> <a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AStijnvWijn" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://toufiqmusah.github.io/toufiqmusah/">

Toufiq

<br /><sub><b>Toufiq</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/commits?author=toufiqmusah" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/bcrobo">

bcrobo

<br /><sub><b>bcrobo</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Abcrobo" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/emmanuel-ferdman">

Emmanuel Ferdman

<br /><sub><b>Emmanuel Ferdman</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Aemmanuel-ferdman" title="Bug reports">🐛</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/AndersDHenriksen">

Anders Dahl Henriksen

<br /><sub><b>Anders Dahl Henriksen</b></sub></a><br /><a href="#maintenance-AndersDHenriksen" title="Maintenance">🚧</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://e-pet.github.io/">

Eike Petersen

<br /><sub><b>Eike Petersen</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Ae-pet" title="Bug reports">🐛</a></td>
</tr>
<tr>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/gaoflow">

Vincent Gao

<br /><sub><b>Vincent Gao</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3Agaoflow" title="Bug reports">🐛</a> <a href="https://github.com/TorchIO-project/torchio/commits?author=gaoflow" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/Jessy-Ding">

Mengyuan Ding

<br /><sub><b>Mengyuan Ding</b></sub></a><br /><a href="https://github.com/TorchIO-project/torchio/issues?q=author%3AJessy-Ding" title="Bug reports">🐛</a></td>
</tr>
</tbody>
</table>

This project follows the
all-contributors
specification. Contributions of any kind welcome!